PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G117500.1.p
Common NameGLYMA_07G117500, LOC100799087
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 323aa    MW: 36624 Da    PI: 7.6124
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G117500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.7e-12150196455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           h + Er+RR++i + f  L  ++P +     kK +Ka++L+ A++Y+k+Lq
  Glyma.07G117500.1.p 150 DHIMSERKRRENIAKLFIALSAVIPVL-----KKTDKASVLKTAIDYVKYLQ 196
                          5999***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.833146195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-16150209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.20E-10151200No hitNo description
PfamPF000101.4E-9151196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-16151213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.1E-13152201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MEESPERWLR FLEMDECNLF GHMHSLVEVF KGENLVQQEK SCKSHPCDSN ITKESTTILL  60
RNPINDSSSL EKNPGFDNRS SLKQHASQDE PLFSSSSMPY TLSFEDSTAV PYVLNKTCQC  120
YHGENSKETQ EEPKNNRKSK RGRSSSEIQD HIMSERKRRE NIAKLFIALS AVIPVLKKTD  180
KASVLKTAID YVKYLQKRVK DLEEESKKRK VEYAVCFKTN KYNIGTVVDD SDIPINIRPK  240
IEARVSGKDA LIKVMCEKRK DIVAKILGKL AALNLSIVCC NVLPFANSAL NITCIAQMDH  300
EFTMTLDDLV KILTEDLFDC CN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154159ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G117500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0968180.0BT096818.1 Soybean clone JCVI-FLGm-15B24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001240220.10.0uncharacterized protein LOC100799087
RefseqXP_028240189.10.0transcription factor bHLH18-like isoform X1
TrEMBLA0A445JVP00.0A0A445JVP0_GLYSO; Transcription factor bHLH25 isoform A
TrEMBLC6TGR50.0C6TGR5_SOYBN; Uncharacterized protein
STRINGGLYMA07G13423.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1634849
Representative plantOGRP6561573
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-39bHLH family protein