PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G117600.1.p
Common NameGLYMA_07G117600, LOC100783561
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 317aa    MW: 35886 Da    PI: 7.2111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G117600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.4e-12139184555
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h ++Er+RR++i   f  L  l+P +     kK++Ka++L  A+e++k+Lq
  Glyma.07G117600.1.p 139 HIMAERKRRENISRLFIALSALIPGL-----KKMDKASVLYNAIEHVKYLQ 184
                          889***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.183134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-16138198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.73E-11139188No hitNo description
Gene3DG3DSA:4.10.280.105.9E-17139199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-9139184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-13140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MDEPWLKWVS ILDTNDYHLS TECDMNSVEE PLEGENSVDP GELSWENHSP NSYLTKERTT  60
LLSNSSSLEE INTSFDMTSL KQHASPQKPK SCILSFEDST SVPITSKKTC QLYHGEHSKE  120
TQEELPNRKP LKRDTSFDHI MAERKRRENI SRLFIALSAL IPGLKKMDKA SVLYNAIEHV  180
KYLQQRVKDL EKDNKKRKTE SVGCFKINKT NVADNVWACD DKPIKICPKV EARVSGKDVV  240
IRVTCEKQKN ILPKLLAKLE AHNLSIVCSN VLPFGNSALS ITSIAKMDHE FSLTVDTYDL  300
VKTLTGELLE CSKMQR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142147ERKRRE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.176880.0root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G117600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003530123.10.0transcription factor bHLH25
TrEMBLK7L1500.0K7L150_SOYBN; Uncharacterized protein
STRINGGLYMA07G13406.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1634849
Representative plantOGRP6561573
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.15e-44bHLH family protein