PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G161100.1.p
Common NameGLYMA_07G161100
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 253aa    MW: 28062 Da    PI: 6.3471
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G161100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.92.2e-091121382350
                          EEEEE-STT---EEEEEE-SSSTTEEEE CS
                 WRKY  23 sYYrCtsagCpvkkkversaedpkvvei 50 
                           YY+Ct+++C+vkk  ers+ d+++++i
  Glyma.07G161100.1.p 112 LYYKCTHPNCEVKKLFERSH-DGQITNI 138
                          5*******************.***9988 PP
2WRKY31.82.9e-10210231122
                          ---SS-EEEEEEE--TT-SS-E CS
                 WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                          ldDgy+WrKYGqK+++++++pr
  Glyma.07G161100.1.p 210 LDDGYCWRKYGQKVMRSNPNPR 231
                          59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575116No hitNo description
PROSITE profilePS508738.7973075IPR002016Haem peroxidase, plant/fungal/bacterial
SuperFamilySSF481136.7E-73082IPR010255Haem peroxidase
Gene3DG3DSA:1.10.520.101.9E-73375No hitNo description
Gene3DG3DSA:2.20.25.807.3E-5112137IPR003657WRKY domain
SuperFamilySSF1182902.35E-5112134IPR003657WRKY domain
PfamPF031062.6E-4112137IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-10196231IPR003657WRKY domain
SuperFamilySSF1182901.19E-8202232IPR003657WRKY domain
PROSITE profilePS5081113.689205231IPR003657WRKY domain
SMARTSM007743.3E-4210245IPR003657WRKY domain
PfamPF031061.7E-5211232IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006979Biological Processresponse to oxidative stress
GO:0055114Biological Processoxidation-reduction process
GO:0098869Biological Processcellular oxidant detoxification
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004601Molecular Functionperoxidase activity
GO:0020037Molecular Functionheme binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MEKGAMVFPF TITVSCLFII FHFANSISGS LVFNFYAASC PTTKFTVRNT VSSSSFDPSI  60
PGKLLCLFFH DCFVEVSSSA SAPVDVDLDD INHKGKAVIV LQASQVEEVN FLYYKCTHPN  120
CEVKKLFERS HDGQITNIPN STLESSPVAT NDDGLDGARF VSNRTNEEVD DGDPFSKRRK  180
MKLDVDITLV VKPIWEPRVV VLTLSEVDIL DDGYCWRKYG QKVMRSNPNP RYGNGYFVRF  240
GTCSGKIVVV AP*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.605211e-112root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G161100.1.p
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY3231281e-106AY323128.1 Glycine max putative WRKY-type DNA binding protein (WRKY1) mRNA, complete cds.
GenBankEU0195551e-106EU019555.1 Glycine max WRKY7 (WRKY7) mRNA, complete cds.
GenBankEU3753501e-106EU375350.1 Glycine max transcription factor (WRKY3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003519618.17e-65probable WRKY transcription factor 20 isoform X1
RefseqXP_006575704.12e-65probable WRKY transcription factor 20 isoform X2
RefseqXP_028221428.17e-65probable WRKY transcription factor 20 isoform X1
RefseqXP_028221443.12e-65probable WRKY transcription factor 20 isoform X3
TrEMBLA0A0R0J8G10.0A0A0R0J8G1_SOYBN; Uncharacterized protein
TrEMBLA0A445JXF30.0A0A445JXF3_GLYSO; Putative WRKY transcription factor 20
STRINGGLYMA02G46690.13e-64(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.12e-45WRKY family protein