PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G227000.1.p
Common NameGLYMA_07G227000
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family FAR1
Protein Properties Length: 119aa    MW: 13545.8 Da    PI: 4.3083
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G227000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.87.3e-086198240
                 FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40
                         fY+eYA++ GF vrk   +++   g+i k +f C+ke +
  Glyma.07G227000.1.p 61 FYREYARSHGFVVRKYDVSQN-VAGNINKCQFICNKEAN 98
                         9***************99998.7888**********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.6E-56198IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MSHNVDVNSD ENDNGDKGDV GIENVEDRED ATNEEDRRIV GLVSDEINVL DFGSEEHAFI  60
FYREYARSHG FVVRKYDVSQ NVAGNINKCQ FICNKEANRI FNVFGDVFAF DTIYKRLN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G227000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0R0J6X42e-78A0A0R0J6X4_SOYBN; Uncharacterized protein
TrEMBLA0A445K0B82e-78A0A445K0B8_GLYSO; Uncharacterized protein
STRINGGLYMA07G35355.15e-62(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Representative plantOGRP1143425