PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.08G077400.2.p
Common NameGLYMA_08G077400
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 230aa    MW: 24874.9 Da    PI: 5.7954
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.08G077400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.93.3e-16155201248
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                          + l+++rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L +e
  Glyma.08G077400.2.p 155 ATLQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENVQLLNE 201
                          5799*************************************999754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-11154226IPR004827Basic-leucine zipper domain
PfamPF001701.8E-14155201IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.438156201IPR004827Basic-leucine zipper domain
CDDcd147071.44E-17158203No hitNo description
SuperFamilySSF579592.69E-11158201No hitNo description
Gene3DG3DSA:1.20.5.1702.8E-14159201No hitNo description
PROSITE patternPS000360161176IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MASSKVVSTN PDLPRNSSSS SSSSSTSPIS PLSSLLSDLH PMDDILKSIS PKSVDDVWND  60
IVTGATVHDA VSATTTDNAD AAMTLEDFLT KAIREEDVRG APPPPPPPPP SSFLPFPADG  120
SSSSVEPFAN GVSAAPSNSV QKGKRRAVEE PVDKATLQKQ RRMIKNRESA ARSRERKQAY  180
TSELEYLVHQ LEQENVQLLN EELFECIIPI EVMPKPKKKL RRVNSAQSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214220KPKKKLR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.70430.0hypocotyl| root| seed coat| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.08G077400.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150342e-40AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014633786.11e-164transcription factor bZIP10 isoform X1
RefseqXP_028243145.11e-164G-box-binding factor 4-like isoform X2
TrEMBLA0A0R0IIL31e-163A0A0R0IIL3_SOYBN; Uncharacterized protein
TrEMBLA0A445JBC61e-163A0A445JBC6_GLYSO; G-box-binding factor 4 isoform B
STRINGGLYMA08G08220.11e-126(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.18e-20bZIP family protein
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]