PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.08G183600.1.p
Common NameGLYMA_08G183600, LOC100101878
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 161aa    MW: 18456 Da    PI: 9.6792
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.08G183600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1475.7e-1579126450
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk.ele 50 
                          l+++rr++kNRe+A rsR+RK+a++ eLe  v  Le+eN  L k e++
  Glyma.08G183600.1.p  79 LQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENAILLKqEAD 126
                          89*************************************987541555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-1176138IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.27778130IPR004827Basic-leucine zipper domain
PfamPF001701.7E-1378127IPR004827Basic-leucine zipper domain
CDDcd147071.59E-1680123No hitNo description
SuperFamilySSF579595.31E-1180130No hitNo description
Gene3DG3DSA:1.20.5.1706.3E-1481135No hitNo description
PROSITE patternPS0003608398IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MASSKVATTT TTTTNSDISS QQVWDGATME MESQDNMNMS MSLQDLLTEN DAVPPSHSHG  60
RGKRKTLVEE PLVVDKVTLQ KQRRMIKNRE SAARSRERKQ AYTVELESLV THLEEENAIL  120
LKQEADRKRQ RFNQLMECLI PVEEKRKPKP MLRRVNSSQW *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.354940.0root
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.08G183600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0922849e-45BT092284.1 Soybean clone JCVI-FLGm-10F13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001345673.11e-115transcription factor bZIP81
RefseqXP_028244266.11e-115G-box-binding factor 4-like
SwissprotP427776e-26GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A0R0IVB61e-114A0A0R0IVB6_SOYBN; Uncharacterized protein
TrEMBLA0A445JGF91e-114A0A445JGF9_GLYSO; G-box-binding factor 4 isoform A
STRINGGLYMA08G19590.27e-83(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Representative plantOGRP8662715
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.17e-32bZIP family protein
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]