PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.08G331300.1.p
Common NameGLYMA_08G331300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 338aa    MW: 39273.7 Da    PI: 6.3406
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.08G331300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.99.4e-08185228447
                          S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          WT eE+  ++ + +  G+++W+ I++++   + + q+ s+ qky
  Glyma.08G331300.1.p 185 WTREEHISFLLGLENVGKKSWTYISQKFVPSKNPFQVASHAQKY 228
                          *****************************9*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.017177229IPR017877Myb-like domain
SuperFamilySSF466891.48E-12178232IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.2E-6180232IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-10180232IPR006447Myb domain, plants
SMARTSM007170.005181231IPR001005SANT/Myb domain
CDDcd001670.00299185229No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MSHEENKNVI EFLDEQAFYY DEEDEQWFKE KDDQWTKNIP CYKEDAANVV LNSVDFDFDM  60
QDLDEFLKDL GTEDSSPERV PDPVVPVTPP TSGRVQVPSP PRVHAPAPQR VYTFADLVSA  120
TSAPTARVPT PHESPEETFN GIASGQVHAP ISHQHHLLQQ NMESNRVMLA DDSSRSVPCK  180
KYTHWTREEH ISFLLGLENV GKKSWTYISQ KFVPSKNPFQ VASHAQKYFK RKNTPKKERK  240
RKSIHDITLD DINTIVNPRI DQHNWIPPPP NFATQPHEIQ QAQPMQQFNL HNPFHQMQQF  300
NLHNPFHQMQ QFQHNMSSQM DRYGYFNNWL HAMEHGN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.08G331300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0R0J2F20.0A0A0R0J2F2_SOYBN; Uncharacterized protein
STRINGGLYMA10G30320.11e-161(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13860414
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.13e-21MYB family protein