PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G017300.2.p
Common NameGLYMA_09G017300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 259aa    MW: 28190.3 Da    PI: 7.98
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G017300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like53.74.5e-1710412455
              G2-like 24 sekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                         s+kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  Glyma.09G017300.2.p 10 SKKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 41
                         59*****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.8E-15842IPR009057Homeodomain-like
TIGRFAMsTIGR015577.2E-111142IPR006447Myb domain, plants
SuperFamilySSF466892.69E-61143IPR009057Homeodomain-like
PfamPF143791.6E-1582127IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MIQKEGGMLS KKATPKAIMR TMNVKGLTLF HLKSHLQKYR LGKQSGKDVG EGCKDGSYLL  60
ESPGADNTSP KLPTPDTNEG YEIKEALRAQ MEVQSKLHLQ VEAEKHLQIR QDAERRYMAM  120
LERACKMLAD QFISATVIDT DSQKFQGIGS KAPRGTLVDP LGFYSLPSTE VAGVNVPEEE  180
ILPSLPPQRA DCSTESCLTS HESSGGLALE GSPGEGKRRM LGMDSMAAPL IWSEAKMRTQ  240
AINVAQGNHP QGITRYGM*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.41650.0cotyledon| flower| hypocotyl| root| seed coat| somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G017300.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0942300.0BT094230.1 Soybean clone JCVI-FLGm-24P5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001242009.20.0MYB-CC domain-containing transcription factor PHR13
RefseqXP_028180000.10.0protein PHR1-LIKE 2-like
TrEMBLA0A0R0I9P00.0A0A0R0I9P0_SOYBN; Uncharacterized protein
STRINGGLYMA09G02030.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.19e-41G2-like family protein