PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G072000.1.p
Common NameGLYMA_09G072000, Glyma09g08330.1, LOC100802508
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 215aa    MW: 23875.2 Da    PI: 4.2991
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G072000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-182070155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         s y+GVr +k +g++v+eIr p++   r+r++lg++++ae+Aa+a +aa+ +l+g
  Glyma.09G072000.1.p 20 SSYRGVRKRK-WGKYVSEIRLPNS---RQRIWLGSYDSAEKAARAFDAAMFCLRG 70
                         67*****999.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.18E-192079IPR016177DNA-binding domain
CDDcd000183.86E-292078No hitNo description
PfamPF008477.0E-112070IPR001471AP2/ERF domain
SMARTSM003802.1E-312184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.8E-292179IPR001471AP2/ERF domain
PROSITE profilePS5103221.0352178IPR001471AP2/ERF domain
PRINTSPR003672.4E-92233IPR001471AP2/ERF domain
PRINTSPR003672.4E-94460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MVKPKSVEKP AEEQQQRSVS SYRGVRKRKW GKYVSEIRLP NSRQRIWLGS YDSAEKAARA  60
FDAAMFCLRG SGAKFNFPSD PPNIAGGGNM TSSQIQIAAA RFANSEPRNE RSDQPVESLT  120
SDEETASFPV ISDTDTSSPP LSDVTFQNDA ELVTGSFPDM FSDFGSGDFV PDFSDFPSFD  180
DFSRDFFLHE LPGFNFGEEN LDGLIIQDSF LWNF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1620801374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.55010.0cotyledon| leaf| pod| stem| vegetative bud
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G072000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0310830.0KT031083.1 Glycine max clone HN_CCL_204 AP2-EREBP transcription factor (Glyma09g08330.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003533795.11e-155ethylene-responsive transcription factor ERF017
RefseqXP_028248625.11e-155ethylene-responsive transcription factor ERF017-like
TrEMBLA0A445IY131e-153A0A445IY13_GLYSO; Ethylene-responsive transcription factor ERF017
TrEMBLI1L1S91e-153I1L1S9_SOYBN; AP2-EREBP transcription factor
STRINGGLYMA09G08330.11e-154(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-44ERF family protein
Publications ? help Back to Top
  1. Chai C, et al.
    Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance.
    BMC Genomics, 2015. 16: p. 596
    [PMID:26268547]