PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G076800.1.p
Common NameGLYMA_09G076800
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family GATA
Protein Properties Length: 172aa    MW: 19254.6 Da    PI: 7.7022
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G076800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA38.71.3e-12731933
                 GATA  9 TplWRrgpdgnktLCnaCGlyyrkk 33
                         TplWR+gp  ++ LCnaCG +y+k 
  Glyma.09G076800.1.p  7 TPLWRNGPVDKPVLCNACGTRYKKG 31
                         ********77777**********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004010.0065144IPR000679Zinc finger, GATA-type
CDDcd002026.65E-11458No hitNo description
PfamPF003202.1E-10631IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.1E-8731IPR013088Zinc finger, NHR/GATA-type
SuperFamilySSF577165.23E-7733No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MNIVPFTPLW RNGPVDKPVL CNACGTRYKK GDLDNYLPKN VHPQLHHNNF KNVNGESHFN  60
AEESLSNHIP PITTSNGDNY KSSSDVHHIS AQDFEKKIPS RKRSSVVYKP MTPMEKFQKQ  120
LLSLYRSERQ PEESLLVDNV NNFIPENEIG LGAILLKTDD AASTDPGSAN R*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G076800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2354531e-144AC235453.1 Glycine max strain Williams 82 clone GM_WBb0167A12, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025985239.12e-76GATA transcription factor 26
TrEMBLA0A0R0IF151e-124A0A0R0IF15_SOYBN; Uncharacterized protein
STRINGGLYMA08G19681.14e-75(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127471024
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.13e-12GATA transcription factor 26