PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G184300.2.p
Common NameGLYMA_09G184300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 159aa    MW: 18595.2 Da    PI: 10.2567
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G184300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.81.3e-0969110445
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                           k  rr+++N eAAr+sR+RKka++++Le    +L++  ++L
  Glyma.09G184300.2.p  69 QKTLRRLAQNCEAARKSRLRKKAYQQQLESSRFKLTQLEQEL 110
                          5888*************************9877777766544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.0E-863115No hitNo description
SMARTSM003380.003666130IPR004827Basic-leucine zipper domain
PfamPF001708.7E-769111IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.2E-670116No hitNo description
PROSITE patternPS0003607388IPR004827Basic-leucine zipper domain
PfamPF004646.2E-12108153IPR001085Serine hydroxymethyltransferase
SuperFamilySSF533831.34E-7113154IPR015424Pyridoxal phosphate-dependent transferase
Gene3DG3DSA:3.90.1150.103.1E-8121153IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016740Molecular Functiontransferase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MEATNVHPPR ISEFGTLDQS LGFRIEDTNC LNLSYIQKHA YFYSKIWCFI VFWQPERCES  60
SGSKDKSNQK TLRRLAQNCE AARKSRLRKK AYQQQLESSR FKLTQLEQEL QRARQQVLYD  120
YKDKINQPVF PGLQGGPYNH TIIGLAVALK QVHKWRRS*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.642190.0cotyledon| flower| hypocotyl| leaf| pod| root| seed coat| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G184300.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0967340.0BT096734.1 Soybean clone JCVI-FLGm-21I11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237631.21e-111bZIP transcription factor bZIP94
TrEMBLA0A0R0IJ491e-115A0A0R0IJ49_SOYBN; Uncharacterized protein
TrEMBLI1M2S01e-115I1M2S0_SOYBN; Uncharacterized protein
STRINGGLYMA13G33480.31e-116(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.39e-16TGACG motif-binding factor 6