PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G184800.1.p
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 293aa    MW: 33110.2 Da    PI: 4.7034
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G184800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.11.9e-071221531953
                  AP2  19 Irdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                          I+dp    +r  r++lg+f+t+eeAa a+++ ++++
  Glyma.09G184800.1.p 122 IKDP----IRgIRIWLGTFDTEEEAAMAYERKKNEF 153
                          5554....23589******************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.23296165IPR001471AP2/ERF domain
CDDcd000184.11E-11114148No hitNo description
SuperFamilySSF541715.75E-8115153IPR016177DNA-binding domain
SMARTSM003800.0044115168IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-9119153IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MLDFPRKTQK QGMKCKRGKE KAPVKEENIN TLRKIITVYT DPDATDSSSE EDDKFFSNGY  60
PLNGCSKWVV KEISLPCMPS NLHEENSSQE DAKGEKIKAS LGPFASRRNR KPSSMYKGVP  120
QIKDPIRGIR IWLGTFDTEE EAAMAYERKK NEFDRKKKYC FIHLHHQCLI TTKAPLDVND  180
LNGSVKEKVN VETNGEDGGI DVEPVYSEDN SILHLLEEPV VPSLVGHDGF YLDEIEKEAM  240
LLGNDFYNFL DNDMEGGSVW NVEHGEGITL PPVDSAFNEL TWIVETLNWE CS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G184800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028238628.11e-164ethylene-responsive transcription factor ERF117-like
TrEMBLA0A0R0IJ640.0A0A0R0IJ64_SOYBN; Uncharacterized protein
STRINGGLYMA13G33441.11e-177(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1598167
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49120.17e-12ERF family protein