PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G188900.1.p
Common NameGLYMA_09G188900, LOC100790166
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Trihelix
Protein Properties Length: 398aa    MW: 45613.2 Da    PI: 4.4504
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G188900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix461.3e-14161246186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          +W ++e+ +L+e+  ++  +l+r++l+   W ev++k+ +e + er+ +qC++ +++l++ry+k+k+++ +     s ++++f++++
  Glyma.09G188900.1.p 161 EWNEHETFVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVsEELKTERTVTQCRSVLDKLKRRYRKEKARMDEI-GLGSCKWAFFKKMD 246
                          5*************************************88899***************************97.78888********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.8E-18160248No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MKIEKFPKLH TVQNPSPILP FPKFNSFKSL PYNLDFASCN LSSIPMDDME DDARYPPKSF  60
SLNRQNPSHR HKHPIRAAPY HRPMPTRYQE PDDDEDDNEP DDFDDDEAEN GYDDENNIAA  120
YPRIPKKRKV VGTAAAGGSY EFAPRVNFSY GNSRGSGSGE EWNEHETFVL LEVWGDKFLQ  180
LGRNSLRSEE WHEVAEKVSE ELKTERTVTQ CRSVLDKLKR RYRKEKARMD EIGLGSCKWA  240
FFKKMDMLMA SSARQEYGLA CGVDSGEYVF MNTRVYLNSS NGFDEMRDSP GESESDDDDE  300
EEDIGGGGGG GDEDEEEDKM SYRVLADSIQ KFGKIYEKIE NSKRQQMMEL EKMRLDFNRE  360
LELQKKQILE RAQAEIAKIQ EVDEEDTDTS GGENLSE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215220DKLKRR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.393010.0root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G188900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003534187.10.0trihelix transcription factor ASIL2
RefseqXP_028181929.10.0trihelix transcription factor ASIL2-like
TrEMBLA0A445J3060.0A0A445J306_GLYSO; Trihelix transcription factor ASIL1
TrEMBLK7LER40.0K7LER4_SOYBN; Uncharacterized protein
STRINGGLYMA09G32130.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Representative plantOGRP4871684
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.15e-92Trihelix family protein