PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G246800.1.p
Common NameGLYMA_09G246800
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 270aa    MW: 31157.1 Da    PI: 9.1212
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G246800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-10134181355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          r h  +Er+RR+++ +++  L   +P +     kK +K+ ++++Av Y+k+Lq
  Glyma.09G246800.1.p 134 RVHILAERKRREELTKSIVALSATIPGL-----KKTDKVNVVREAVSYVKQLQ 181
                          56999***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.09E-14131196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.202131180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.91E-9132185No hitNo description
Gene3DG3DSA:4.10.280.103.6E-13135193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-8135181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-11137186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
HLLLQIILST TPLVVRAQIP FMLIMEDSRM DLLSQWEMGD DDFFNNQIHM ISFTEEKSSK  60
DMIFQQEVFS SSSSSSSLQS NLKPCSPFPT GGYVLSFDKP VVEPLYPKKH HSPKSLAQSQ  120
YCVEPKAFPR TRPRVHILAE RKRREELTKS IVALSATIPG LKKTDKVNVV REAVSYVKQL  180
QERVKELENQ KRKESMNSII LNKHRPLSIN DQATHGFVDV NEELLEVKVT VLDKEVLIGI  240
YCEKQRQRLL KYCHCLISPS FYHPYQRIAI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139144ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G246800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025979730.11e-171transcription factor bHLH25
TrEMBLA0A0R0ICZ30.0A0A0R0ICZ3_SOYBN; Uncharacterized protein (Fragment)
STRINGGLYMA09G38241.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1872846
Representative plantOGRP5571678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-27bHLH family protein