PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G057400.1.p
Common NameGLYMA_10G057400, LOC100779699
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family TCP
Protein Properties Length: 191aa    MW: 20193.9 Da    PI: 7.043
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G057400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP113.72.5e-3537117285
                  TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasns 85 
                           +k+ +++++hTkv+gR+RR+R++ +caar+F+L++eLG+ +d++tieWLl+ a+p+i+++tg+++ +a  +   ss+  ++ s
  Glyma.10G057400.1.p  37 VVKRPSTKDRHTKVNGRGRRIRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTVPAAPV---SSVAPSAPS 117
                          6799************************************************************88888443...333332222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.6E-2942119IPR005333Transcription factor, TCP
PROSITE profilePS5136926.9944397IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MTSQVVLHNN FETQPSVTVT TATNTESPPT APPSLAVVKR PSTKDRHTKV NGRGRRIRMP  60
PLCAARIFQL TRELGHRSDG ETIEWLLRHA EPSIIAATGS GTVPAAPVSS VAPSAPSSEP  120
MVACPVTAVG AQGMFAMAPP QPQPNCRLDL SPPAGLEFAV NGYRHMPFTA LLLQPATAED  180
NQNDESLGEQ *
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G057400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003537001.11e-137transcription factor TCP11
RefseqXP_028183575.11e-137transcription factor TCP11-like
SwissprotQ9SJK78e-44TCP11_ARATH; Transcription factor TCP11
TrEMBLA0A445IIB91e-136A0A445IIB9_GLYSO; Transcription factor TCP11
TrEMBLK7LHN71e-136K7LHN7_SOYBN; Uncharacterized protein
STRINGGLYMA10G06515.11e-136(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38193363
Representative plantOGRP9221459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37000.12e-45TCP family protein