PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G066900.1.p
Common NameGLYMA_10G066900, LOC100811614
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 205aa    MW: 21833.4 Da    PI: 4.9598
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G066900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.57e-184089255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                         +y+GVr++  +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  Glyma.10G066900.1.p 40 KYRGVRRRT-SGKWVSEIREPK----KpNRIWLGTFPTPEMAAVAYDVAALALKG 89
                         8*****888.8*********94....468***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-104089IPR001471AP2/ERF domain
SMARTSM003801.7E-3340103IPR001471AP2/ERF domain
CDDcd000184.12E-324099No hitNo description
SuperFamilySSF541716.54E-214099IPR016177DNA-binding domain
PROSITE profilePS5103223.0374097IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.9E-304099IPR001471AP2/ERF domain
PRINTSPR003674.7E-84152IPR001471AP2/ERF domain
PRINTSPR003674.7E-86379IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MASLNHLRIS LSTQLFIHID TMYSGNASSS SSRGSSGSGK YRGVRRRTSG KWVSEIREPK  60
KPNRIWLGTF PTPEMAAVAY DVAALALKGK DAGLNFPDSA SSLPVPASLS ARDIQVAAAA  120
AAAAAGAAND AMRTQTANNN FSEAQENQTG MSNQFVDEDL IFDMPNVLVN MAQGMLLSPP  180
PFDIGLEPNS PENTEQETNL WNFP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1639971372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G066900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003537044.21e-149ethylene-responsive transcription factor ERF024
RefseqXP_028182548.11e-149ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR01e-47ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A445IIW91e-147A0A445IIW9_GLYSO; Ethylene-responsive transcription factor ERF024
TrEMBLK7LHT11e-147K7LHT1_SOYBN; Uncharacterized protein
STRINGGLYMA10G07740.21e-148(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-24ERF family protein