PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G173500.2.p
Common NameGLYMA_10G173500, LOC100813558
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 812aa    MW: 90816.8 Da    PI: 4.4252
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G173500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.29.2e-066286651355
                          HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          R++i +++ eLr+++P++     +K s  + L ++++Y+  Lq
  Glyma.10G173500.2.p 628 RQQIQDCIKELRRIIPND-----GKCSIDSLLDRTIRYMLFLQ 665
                          89***************9.....8999999**********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142151.3E-1459149IPR025610Transcription factor MYC/MYB N-terminal
CDDcd000832.85E-4608669No hitNo description
PROSITE profilePS5088811.236615664IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-6628670IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-4628669IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0035556Biological Processintracellular signal transduction
GO:0005829Cellular Componentcytosol
GO:0004674Molecular Functionprotein serine/threonine kinase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 812 aa     Download sequence    Send to blast
MTMAMTMPLT LRNKLKTLCT CGDGWSYAIF WRFHPRNSLL LTVEEAYYEE HLGEEIANMH  60
PQVHLLGEGI VGEAASTGKH SWVHSDGQTH DWNLTGQNIC EDDSEFQQQF SSGIKTIVVV  120
PVKAWGVVQF GSRKKILEKV EFLEQTQSVL TDMDDDMGMF DMPGNSVLPL DCENNDLNGL  180
WDSISSANPN NSFPSQYMTY DKAMVSLQED SSYFSDQLKG TMEAQIVLSD RDSADVLLKP  240
NSSTNKLIAE NPYFGVCGSE LSSFNLLEQQ LVSCVSAQED ADACFTNQND FAASKLLVQD  300
SALTSLCSMD RGSFQGKLQN SLDNQYPTQS GVVIDVDFSS SSNALHGLSE NLEPVDMSEE  360
ILNFSPMEDL CQWFGPSPED SICEAVIALD NNFSESTEFN PTSFDLVGSS SLNDISVTCL  420
AEHNSNSNGK EASVVMQSTE KGLFDSMEFD FSYDQGDEWW GNMLSPVVSG VTDTGFSECV  480
SELNTTDALT GTRKRLFSEL GIEELLRGGA NYNPFNSSEL EYELSPNKSE TVESSSVNRN  540
PIHFTNFHWP GARADLTQRL CDLDNTNNLP TKKDKFPKLQ TGMWIDDSHS INIGKAVPVH  600
PQKPEEPRKP SKKRARPGES TRPRPKDRQQ IQDCIKELRR IIPNDGKCSI DSLLDRTIRY  660
MLFLQSVLKY SDKLQEPNEP KAKEVVLKDS GAADSKNGGI TWAYEVAHQT MLYPVIVEDM  720
SLPGQMLIEM LCEEQGFFLE IIDKIQRFGL NILKAKMERR KTKLWARFIV EANRPVTRIE  780
VFLYLIHLLQ ETNTSGIDSS NKHCDVIEAN I*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G173500.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006589237.10.0transcription factor bHLH155 isoform X2
RefseqXP_028183398.10.0transcription factor bHLH155-like isoform X2
TrEMBLA0A0R0HUN60.0A0A0R0HUN6_SOYBN; Uncharacterized protein
TrEMBLA0A445INW00.0A0A445INW0_GLYSO; Transcription factor LHW isoform B
STRINGGLYMA10G31691.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.11e-36conserved peptide upstream open reading frame 7