PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G206300.1.p
Common NameGLYMA_10G206300, LOC100793512
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 505aa    MW: 56054.2 Da    PI: 6.6119
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G206300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000514004321855
                          HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +++  L++++ +      +K + a++L +A+ YIk Lq
  Glyma.10G206300.1.p 400 DKITALQQIVSPF-----GKTDTASVLFEAIGYIKFLQ 432
                          7888889988887.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.642382431IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-9397446IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.0E-8397439IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.41E-4400436No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045944Biological Processpositive regulation of transcription from RNA polymerase II promoter
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0001228Molecular Functiontranscriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MTEESAGNTV ATSITPFNWW YLQANSLSSW NDTNSTWSNQ PNPNSSSSCE EDISVSTSFT  60
NASNHSSLTV ESSRRLIEPP APSSTELMGE HASDNQLWSH VLSGVGSDGE LHNSQEIGEN  120
FLDALSSKSM TSTMFQPVCD YLKKLDHTSW EYNGSTSLNS FEKHLNGFSE AMLENNERLT  180
KLSNLVSTWS IAPPDPEVSS HFDPQKTNNM SLSSNSMDHH FPQFEHFKQP FEEASRNSGV  240
FPNCYDHDMK VKQEYHASEV SPGSVFGKPL NANGYRNGFN SLSVVDSCKL YHDMPNISSC  300
TRNFSDVISF NSRLGWPVIG VHGQKPSMKY LNVSEPKKQG LQTPSPPIRT NVNGKGEGTT  360
REVKKKRSEE SSDAMLKKPK QDTSTASSSK VQAPKVKLGD KITALQQIVS PFGKTDTASV  420
LFEAIGYIKF LQEQVQLLSN PFLKANSHKD PWGSLDRKDH KEDTKLDLRS RGLCLVPTSC  480
TPLVYRESSG PDYWTPAYRG CLYR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G206300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0926770.0BT092677.1 Soybean clone JCVI-FLGm-11D9 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006589396.10.0transcription factor bHLH111 isoform X3
RefseqXP_028183173.10.0transcription factor bHLH111-like isoform X3
TrEMBLA0A445IQ930.0A0A445IQ93_GLYSO; Transcription factor bHLH111 isoform A
TrEMBLI1LCV30.0I1LCV3_SOYBN; Uncharacterized protein
STRINGGLYMA10G35040.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101162629
Representative plantOGRP962056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.17e-66bHLH family protein