PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G269600.1.p
Common NameGLYMA_10G269600
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 226aa    MW: 25734.6 Da    PI: 6.2831
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G269600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like612.5e-193990355
              G2-like  3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                          ++WtpeLH +F ea++ + G++ A Pk+il lm+ + Lt+ +v+SHLQk+R+
  Glyma.10G269600.1.p 39 SIVWTPELHLKFTEAMHMI-GENTARPKQILSLMNEPYLTVRQVASHLQKHRS 90
                         579****************.9******************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.2E-203594IPR009057Homeodomain-like
SuperFamilySSF466891.25E-163694IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-183791IPR006447Myb domain, plants
PfamPF002495.8E-64289IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MLREKGTIDG NAMPDSGEST PMSSYNYHYH CLFDERKRSI VWTPELHLKF TEAMHMIGEN  60
TARPKQILSL MNEPYLTVRQ VASHLQKHRS RLKHKENAHN TNLPSLSTSS SLSHKAKFPL  120
PPKESTSGAK EHKRAFDPSV STPKASFNEN HNQNQFFVNN IGIEESNILP VDQNQPAIEY  180
NDLIKKFVED CDNFDLFENE TNPDDVDQYS EMLRTILDGS SSSPW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G269600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014618329.21e-170transcription activator GLK1
TrEMBLA0A0R0I6I21e-168A0A0R0I6I2_SOYBN; Uncharacterized protein
TrEMBLA0A445ITE81e-168A0A445ITE8_GLYSO; Transcription activator GLK2 (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144041618
Representative plantOGRP11571753
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44190.18e-14GOLDEN2-like 2