PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G281000.1.p
Common NameGLYMA_10G281000
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 245aa    MW: 27281.3 Da    PI: 6.0859
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G281000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.83.1e-101203655
              G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                         m+vkgLt++hvkSHLQ+YR+
  Glyma.10G281000.1.p  1 MDVKGLTISHVKSHLQMYRS 20
                         9******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-9122IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MDVKGLTISH VKSHLQMYRS MRGDLGRQGR TPSQHRNQSF EEHDDGCVDE VNDVGVEYSC  60
SKPLGRESDS FFGHSNLPPK RARIEMRSSI SERLQQCSQR LCDVVVPNPY CFYDYLKQKK  120
PMPMADQHSP PFPDFPNLTS FKSPDQQSDF LQVTKLNEGK STSQTINVLV NTTTETANVE  180
IEDELSLSLT LPNPSPQRSS GSEISEAISS CHGFSNNYKD CSSSSTHTVK ERINLDLSLA  240
LCGN*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.40760.0leaf| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G281000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0982250.0BT098225.1 Soybean clone JCVI-FLGm-16F9 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028183350.10.0uncharacterized protein LOC114370250
TrEMBLI1LF380.0I1LF38_SOYBN; Uncharacterized protein
STRINGGLYMA10G42750.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55393353
Representative plantOGRP28515123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.18e-07G2-like family protein