PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.12G045100.1.p
Common NameGLYMA_12G045100
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 107aa    MW: 12100.6 Da    PI: 4.768
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.12G045100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.82.1e-07868363
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                         e k +rrkq+ ++A++rsR + k+e e+L +  ++L+ e  aL++el   + e++k ++e+
  Glyma.12G045100.1.p  8 EEKEQRRKQQKKIASKRSRMKIKMEREKLIDSLESLDDEKAALREELHDRTIECEKIEKEN 68
                         6799*****************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.5E-6465No hitNo description
SMARTSM003380.0038670IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.071871IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MCTTETAEEK EQRRKQQKKI ASKRSRMKIK MEREKLIDSL ESLDDEKAAL REELHDRTIE  60
CEKIEKENNA LLAELIEEYG EETIMNLLNA QSTDSVAGGG QGSKNS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.12G045100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028192621.11e-63rho GTPase-activating protein gacHH-like
TrEMBLK7LT085e-68K7LT08_SOYBN; Uncharacterized protein
STRINGGLYMA12G04933.19e-69(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3600722