PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G075000.1.p
Common NameGLYMA_13G075000, LOC100798549
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 279aa    MW: 30822.9 Da    PI: 9.3246
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G075000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1414.1e-13201244548
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                          +r rrk+kNRe+A rsR+RK+a+  eL  kv  Le+eN +Lkke
  Glyma.13G075000.1.p 201 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENVKLKKE 244
                          6889**************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-11197263IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909199244IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-10201245No hitNo description
PfamPF001705.2E-11201244IPR004827Basic-leucine zipper domain
CDDcd147079.82E-16201247No hitNo description
Gene3DG3DSA:1.20.5.1704.8E-12201244No hitNo description
PROSITE patternPS000360204219IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MGIQTMGSQG NGQQSHLQPS SLSRQGSWYS LTLDEVNCQL GDMGKPLGSM NLDELLQNVW  60
TAEASKSLVI GAESENMSSS SSLQRQASLT LARALSGKTV DDVWREIQQG QKKRYGEDVK  120
SQEGEMTLGE TTLEDFLVQA GLFAEASISP AVGLDTMDSS AAQGFQQKTG LLSSPSIGSL  180
SDTRPGRKRD APDAYEKTLE RRLRRKIKNR ESAARSRARK QAYHNELVSK VSRLEEENVK  240
LKKEKLCCYV HKAIFVYMSL LKITFNNKEV QRLKIVAD*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.505280.0cotyledon
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G075000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150380.0AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006593615.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X1
RefseqXP_006593616.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X1
RefseqXP_028195820.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X1
RefseqXP_028195821.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X1
SwissprotQ9C5Q22e-53AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBLA0A0R0GJQ00.0A0A0R0GJQ0_SOYBN; Uncharacterized protein
TrEMBLA0A445HCF40.0A0A445HCF4_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform A
STRINGGLYMA13G03880.41e-177(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF124642532
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.34e-39bZIP family protein
Publications ? help Back to Top
  1. Haas BJ, et al.
    Full-length messenger RNA sequences greatly improve genome annotation.
    Genome Biol., 2002. 3(6): p. RESEARCH0029
    [PMID:12093376]
  2. Sakuraba Y,Han SH,Lee SH,Hörtensteiner S,Paek NC
    Arabidopsis NAC016 promotes chlorophyll breakdown by directly upregulating STAYGREEN1 transcription.
    Plant Cell Rep., 2016. 35(1): p. 155-66
    [PMID:26441053]
  3. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]