PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G260300.1.p
Common NameGLYMA_13G260300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 162aa    MW: 19431.3 Da    PI: 9.5258
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G260300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1279.8e-0969110445
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                           k  rr+++N eAAr+sR+RKka++++Le    +L++  ++L
  Glyma.13G260300.1.p  69 QKTLRRLAQNCEAARKSRLRKKAYQQQLESSRFKLTQLEQEL 110
                          5888*************************9777777666544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-763115No hitNo description
PfamPF077161.2E-566117IPR004827Basic-leucine zipper domain
SMARTSM003380.002966132IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.84E-770116No hitNo description
PROSITE patternPS0003607388IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MEATNVHPPR ISEFGTLDQS LGFRIEDTNC LNLSYIQKHA YFYSKIWCFI VFWQPERCES  60
SGSKDKSNQK TLRRLAQNCE AARKSRLRKK AYQQQLESSR FKLTQLEQEL QRARQQVWFC  120
TYIYCFRSKF DTYPAILLTQ LMYFFEEAYQ NRLIRIISYL L*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.642190.0cotyledon| flower| hypocotyl| leaf| pod| root| seed coat| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G260300.1.p
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0967340.0BT096734.1 Soybean clone JCVI-FLGm-21I11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237631.21e-81bZIP transcription factor bZIP94
TrEMBLA0A0R0H3W81e-116A0A0R0H3W8_SOYBN; Uncharacterized protein
STRINGGLYMA13G33480.35e-81(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1971945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.35e-16TGACG motif-binding factor 6