PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G272500.2.p
Common NameGLYMA_13G272500
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 316aa    MW: 35234.5 Da    PI: 6.3174
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G272500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.81.1e-081792151450
                          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                          R +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Glyma.13G272500.2.p 179 RQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 215
                          89**************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.2E-7170230IPR004827Basic-leucine zipper domain
CDDcd147031.20E-16172221No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-8179221No hitNo description
PfamPF077165.0E-5179215IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.53E-7179224No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MAQLPPKIPT IPQNWPSFPH QRVPSMANFN PTTSTTTATT TPPPPSWVDE FLDFSSARRG  60
AHRRSASDSI TFLEAPFLDE CRAGFDRLDE DQLISMFSDD IAAASLPPPP PLSSASNPSS  120
PASDQNSSEE KPMEMALDVK PKAETLEEES SYKDEEAAPQ PSAIATCTET VVDPKRVKRQ  180
SAQRSRVRKL QYISELERSV TTLQTEVSAL SPRVAFLDHQ RLILNVDNSA LKQRIAALAQ  240
DKIFKDAHQE ALKKEIERLR QIYHQQNLQK MNSNLQQTTP TSQPQQQPMQ LHHHQQPIAV  300
SQPLGCKDNK EQLLS*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.287590.0root| stem
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G272500.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003543224.10.0basic leucine zipper 61
SwissprotQ9M2K44e-90BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A0R0GUR60.0A0A0R0GUR6_SOYBN; Uncharacterized protein
STRINGGLYMA13G34770.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-76bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]