PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G057900.1.p
Common NameGLYMA_14G057900
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 324aa    MW: 35573.9 Da    PI: 9.0473
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G057900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.3e-184190255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  Glyma.14G057900.1.p 41 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAAIILYG 90
                         59****999.**********954...5**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.06E-204198No hitNo description
Gene3DG3DSA:3.30.730.102.0E-294198IPR001471AP2/ERF domain
PROSITE profilePS5103222.2734198IPR001471AP2/ERF domain
SMARTSM003801.4E-3741104IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-214198IPR016177DNA-binding domain
PfamPF008475.6E-124186IPR001471AP2/ERF domain
PRINTSPR003672.4E-104253IPR001471AP2/ERF domain
PRINTSPR003672.4E-106480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006970Biological Processresponse to osmotic stress
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0009744Biological Processresponse to sucrose
GO:0009749Biological Processresponse to glucose
GO:0010119Biological Processregulation of stomatal movement
GO:0010353Biological Processresponse to trehalose
GO:0010449Biological Processroot meristem growth
GO:0010896Biological Processregulation of triglyceride catabolic process
GO:0031930Biological Processmitochondria-nucleus signaling pathway
GO:0032880Biological Processregulation of protein localization
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048527Biological Processlateral root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
KPNHGTHTET TPSETSTVHT NNKISSRKCK GKGGPDNNKF RYRGVRQRSW GKWVAEIREP  60
RKRTRKWLGT FATAEDAARA YDRAAIILYG SRAQLNLQPS GSSSQSSSSR SSSSSTQTLR  120
PLLPRPSGFS VNFPFNTATV PYPYNNSHNY TYSPPVLCPN DNHNNNIVQV HHPHHHRCPE  180
ELVQVQVAHT LSTSYQHNSE SDVGLGVNNN VFVVDGSIRS TSYQRHGFLD SNNNHVHVQV  240
QHGVLSNQQQ QQHQNGVVVE GVNNSPVVGS VASAMDASSV DPDLALVGTV GLGSSSPFWS  300
MANEDDYTVQ IHFAAGDWEA NQR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-194297359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.193471e-161cotyledon| pod| root| somatic embryo
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00674SELEXTransfer from GRMZM2G093595Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G057900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2358820.0AC235882.2 Glycine max clone GM_WBc0011M13, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014622037.10.0LOW QUALITY PROTEIN: ethylene-responsive transcription factor ABI4-like
TrEMBLA0A0R0G9L00.0A0A0R0G9L0_SOYBN; Uncharacterized protein (Fragment)
STRINGGLYMA14G06290.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF88472940
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.12e-36ERF family protein