PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G181500.1.p
Common NameGLYMA_14G181500, LOC100782838
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 241aa    MW: 26825.3 Da    PI: 9.2257
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G181500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.14.3e-154087254
                         HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                         +++h e+ErrRR+riNs +++Lr+llP+a      K +Ka+ L ++ve++k L
  Glyma.14G181500.1.p 40 CKSHREAERRRRQRINSHLSTLRSLLPNA-----AKSDKASLLGEVVEHVKRL 87
                         789*************************8.....7****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.0753887IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-124087IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.9E-144191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-144196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-124493IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.76E-55190No hitNo description
Gene3DG3DSA:3.30.70.2601.3E-5138202No hitNo description
SuperFamilySSF550217.63E-5138203No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MVPFRRFYGF ERWLDHHAAH SPMELNAARS KTERKSTEAC KSHREAERRR RQRINSHLST  60
LRSLLPNAAK SDKASLLGEV VEHVKRLRKQ ADDVARGDSS SSSRSAQPGS VRSEAWPFPG  120
ECDEATVSFC DGGEPKRVKA TVCCEDRAGL NRDVGQVIRS VRAKPVRAET MTVGGRTKSV  180
VVVEWEKEEE VGELERALRA VVENRALVGF GMGHVFVGQK RGRDCCEVDS DFLLRNGSFC  240
*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.381700.0somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G181500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351871e-161AC235187.1 Glycine max strain Williams 82 clone GM_WBb0010C08, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003544243.11e-175transcription factor bHLH30
TrEMBLK7M7S91e-174K7M7S9_SOYBN; Uncharacterized protein
STRINGGLYMA14G36010.21e-175(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF114412834
Representative plantOGRP37715106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.14e-26basic helix-loop-helix 32