PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G186000.1.p
Common NameGLYMA_14G186000, LOC100796599
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 304aa    MW: 33919.9 Da    PI: 7.3259
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G186000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.72.7e-24125185259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                          dD + WrKYGqK v +sefprsY+rC ++   gC +kk+v+r++e+ ++  +tY g H+++
  Glyma.14G186000.1.p 125 DDNHVWRKYGQKGVLNSEFPRSYFRCGHKydqGCLAKKQVQRDQENSNMYRTTYIGIHTCN 185
                          8***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-23119186IPR003657WRKY domain
SuperFamilySSF1182902.22E-23122186IPR003657WRKY domain
SMARTSM007746.8E-34124186IPR003657WRKY domain
PfamPF031063.6E-22125184IPR003657WRKY domain
PROSITE profilePS5081120.139125187IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MNNSLCPESE ISISAKKNRM IMKELVKGQE SATQLKVLLE KPFGSEGSLS CQELTANVLR  60
SFTQAISIIN SSSADEVAHR SLLNSGQNGS PVAVSGENRS QKGGRGRYNR RKSAVSWSIL  120
SCTTDDNHVW RKYGQKGVLN SEFPRSYFRC GHKYDQGCLA KKQVQRDQEN SNMYRTTYIG  180
IHTCNATTKA THSATDLLNS DHDSEVPNVQ DHHISPPSLN IKQTFPKENT PSDVTDHMLN  240
PSMWSALKDF EPSNKPTIVP LMMETDTNNV DNVYSSQRLD MDFRVPSVHF GTDFPFDEGH  300
FLI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-20118184268OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G186000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003544262.10.0probable WRKY transcription factor 70
TrEMBLK7M7W60.0K7M7W6_SOYBN; Uncharacterized protein
STRINGGLYMA14G36438.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-38WRKY DNA-binding protein 70