PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G186100.1.p
Common NameGLYMA_14G186100, LOC100797129
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 241aa    MW: 26970.3 Da    PI: 9.1682
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G186100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.62.9e-24133193259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                          dD + WrKYGqK v ++efprsY+rC ++   gC++ k+v+r++e+p++  itY g H+++
  Glyma.14G186100.1.p 133 DDNHVWRKYGQKRVLNTEFPRSYFRCGYKydqGCKANKQVQRDQENPNMYRITYIGIHTCN 193
                          8***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-23122193IPR003657WRKY domain
SuperFamilySSF1182902.09E-23129194IPR003657WRKY domain
SMARTSM007742.9E-33132194IPR003657WRKY domain
PROSITE profilePS5081119.577132195IPR003657WRKY domain
PfamPF031061.3E-22133192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MNNIVCFASE ISVSTQKKRV IIEELLKGQE AATQLKVLLL EKPFWSEAFL SFQEVMDNVL  60
RSFSEALSIL NSSSSSEPAG SAAEVAHRSL LNSGQNGSPV AASGEKRFQK DGRGRYNRRK  120
SAVSWTILSC TIDDNHVWRK YGQKRVLNTE FPRSYFRCGY KYDQGCKANK QVQRDQENPN  180
MYRITYIGIH TCNATPKATH SATDSNTWES FLLNSDGEVP NSPSLTIKQQ FPKENTSSLI  240
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-21132192868OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G186100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006596397.10.0probable WRKY transcription factor 70
TrEMBLK7M7W81e-180K7M7W8_SOYBN; Uncharacterized protein
STRINGGLYMA14G36446.11e-180(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.19e-33WRKY DNA-binding protein 70