PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G189300.2.p
Common NameGLYMA_14G189300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family NAC
Protein Properties Length: 470aa    MW: 51767.9 Da    PI: 4.4015
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G189300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.92.3e-11126102127
                  NAM 102 lkktLvfykgrapkgektdWvmheyr 127
                          +kktLvfy+grapkg++t+Wvmheyr
  Glyma.14G189300.2.p   1 MKKTLVFYTGRAPKGKRTNWVMHEYR 26 
                          8************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023653.3E-4126IPR003441NAC domain
SuperFamilySSF1019414.97E-15150IPR003441NAC domain
PROSITE profilePS5100520.965150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MKKTLVFYTG RAPKGKRTNW VMHEYRPTLK ELEGTNPGQN PYVLCRLFKK QDESLEASNG  60
DDVERTASTP TTANYCPDEI QSDSALVPAS SSQVTEDDKP LPVISENSEE AISNIITPGD  120
IHSDECDAPD AQYQIVEPVA EEDQLLSVDI FYDPTNQQLD DKLFSPVHAH FPADFYYQAN  180
NQSELQYGTS ENISEFFDSV VNWDSFSYAT SSLDLGSSFL NPKDNGSGSD SDVEMANMLH  240
LQALHDYPKE AVEEKFNVGL FQNNPQMAFS NDGPMGQVHN VANYCEQPRN FDAFVNGDTG  300
IRIRTRHGRN EQPNMNMMIQ SQGIAPRRIR LGVVRRPLGS QETAKDGSCA CAPEDHNSKT  360
IISAEKKASE NHAADESSTV SDESSTVTDD SDEPEEASPK STDPRKISQQ HVATAESISG  420
SKDLLVSRRG CYTSKVSSNC AMWSYVLAVS ATVLVSAILL VNIWAYVRS*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.532500.0leaf| root| somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G189300.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX5690450.0JX569045.1 Glycine max NAC transcription factor (NAC012) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006596412.10.0protein NTM1-like 9
TrEMBLI1MB700.0I1MB70_SOYBN; Uncharacterized protein
STRINGGLYMA14G36840.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.13e-32NAC transcription factor-like 9