PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G199800.1.p
Common NameGLYMA_14G199800, LOC102667674
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 333aa    MW: 38066 Da    PI: 7.7678
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G199800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.23.8e-24221276258
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                           DgynWrKY  K+vkgs +  sYY+Ct+++C vkkkver+  ++++v+i+Y+g+H+h
  Glyma.14G199800.1.p 221 GDGYNWRKYEDKVVKGSANQLSYYKCTQPTCYVKKKVERTI-EGEIVDIHYQGTHTH 276
                          6****************************************.**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.937215276IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.1E-20217276IPR003657WRKY domain
SuperFamilySSF1182901.83E-18218276IPR003657WRKY domain
SMARTSM007743.2E-21220278IPR003657WRKY domain
PfamPF031064.2E-17222276IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005794Cellular ComponentGolgi apparatus
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MPFRNSNMIV QKKLWRIVGF LSSVIGLICY ALSSSFNHLF GEWNFLKIIL YAVISFSISS  60
IMLLLKKWKL SKSFMLKAHV GVLVLLITSV YSFVSDKAVN GKPDMLSLIS CFAFAFMSLC  120
LSKQIDLGFG ADLLNFFLGC LTVQLMHIHL MLSIVAAIFC YCFMFFRSKL DSQSQIGTVE  180
VEDHVNIEID AEDGKREFDD NRSDFQANHS HQQVPLLRMV GDGYNWRKYE DKVVKGSANQ  240
LSYYKCTQPT CYVKKKVERT IEGEIVDIHY QGTHTHCERM HNMKRNSSSE YLYSVLPSEP  300
VTFPDQSFAS QGNGELDYHV QQQRTPQYPN EI*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.301970.0flower| leaf
Function -- GeneRIF ? help Back to Top
  1. The legume-specific, Golgi apparatus-localized GmWRP1 and GmExo70J proteins are probably involved in Golgi-mediated vesicle trafficking of biological molecules that are uniquely important to legumes. [GmWRP1]
    [PMID: 25805717]
  2. A novel WRKY-related protein, WRP1, is described. It is localized to Golgi apparatus through a novel N-terminal transmembrane domain. Suppression of GmWRP1 using virus- or artificial microRNA-mediated gene silencing resulted in accelerated leaf senescence and reduced nodule formation. Legume-specific GmWRP1plays important roles not only in legume symbiosis but also in other processes critical for growth and development.
    [PMID: 27572297]
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G199800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2362330.0AC236233.2 Glycine max clone GM_WBc0210H12, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001340431.10.0WRKY-related protein 1
TrEMBLI1MBG90.0I1MBG9_SOYBN; Uncharacterized protein
STRINGGLYMA14G37960.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF147431012
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.14e-20WRKY family protein
Publications ? help Back to Top
  1. Chi Y, et al.
    Identification and characterization of a novel group of legume-specific, Golgi apparatus-localized WRKY and Exo70 proteins from soybean.
    J. Exp. Bot., 2015. 66(11): p. 3055-70
    [PMID:25805717]
  2. Wang Z, et al.
    Expression and Functional Analysis of a Novel Group of Legume-specific WRKY and Exo70 Protein Variants from Soybean.
    Sci Rep, 2016. 6: p. 32090
    [PMID:27572297]