PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G045700.1.p
Common NameGLYMA_15G045700
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family GATA
Protein Properties Length: 134aa    MW: 15327.6 Da    PI: 10.0858
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G045700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA23.39.2e-087793420
                 GATA  4 CgttkTplWRrgpdgnk 20
                         C+t kTp+WR+gp g+k
  Glyma.15G045700.1.p 77 CKTRKTPMWRKGPLGPK 93
                         ***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.50.103.9E-56791IPR013088Zinc finger, NHR/GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MNIEDAIAYN RETTIQANSA AKGATSEDTR QVEPKYIASV SFTPARISQY LRRRRHHRGA  60
ESKQSTDPDK LCTNFYCKTR KTPMWRKGPL GPKVNSEQLK THMHLSPIYV TSYMYVSMTK  120
PGFLSVMYIY IIE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G045700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028204206.11e-88uncharacterized protein LOC114388071
TrEMBLK7M9L94e-96K7M9L9_SOYBN; Uncharacterized protein
STRINGGLYMA15G05065.16e-97(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2017433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.14e-07GATA transcription factor 29