PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G075800.2.p
Common NameGLYMA_15G075800
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Dof
Protein Properties Length: 249aa    MW: 26400 Da    PI: 10.3916
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G075800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof42.51.4e-134303662
               zf-Dof 36 CrryWtkGGalrnvPvGggrrknkkss 62
                          rryWt+GG+lrnvPvGgg+rk k+++
  Glyma.15G075800.2.p  4 FRRYWTQGGTLRNVPVGGGCRKGKRAK 30
                         59********************99976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-7528IPR003851Zinc finger, Dof-type
PfamPF027019.4E-9528IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MHKFRRYWTQ GGTLRNVPVG GGCRKGKRAK SSNSSSSENM NSSSRSLPQQ QQQPQGVVVQ  60
TQAPPLTTVV KAKDPSSVVA STFYQSGGYL SSLAAMHSLN SSSHPFDHSL NFAGSDTLRS  120
SNLGLLSGFN VQRPIGPIRP PHLYHQMGSG EREMVSLYEQ GLVNPSSSSM ANTDTNSSGV  180
SQHDWPMSFI NNNNNNASNR ASDASLWSTI STTVGGNAER TSPSGVGAGS SSFVKNQWPN  240
LPGYGPPP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G075800.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2352680.0AC235268.1 Glycine max strain Williams 82 clone GM_WBb0044I02, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006597450.11e-176dof zinc finger protein DOF1.6
RefseqXP_028202866.11e-176dof zinc finger protein DOF1.6-like
TrEMBLA0A0R0G6G81e-179A0A0R0G6G8_SOYBN; Uncharacterized protein
STRINGGLYMA15G08230.11e-175(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.16e-10OBF binding protein 4