PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G077000.1.p
Common NameGLYMA_15G077000, LOC100802655
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 173aa    MW: 18761.4 Da    PI: 10.2754
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G077000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.13e-201464256
                  AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                         +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++l+g+
  Glyma.15G077000.1.p 14 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSLRGA 64
                         69*******.**********883....5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.70E-301473No hitNo description
PROSITE profilePS5103222.7211471IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.8E-321471IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-221471IPR016177DNA-binding domain
PfamPF008473.0E-131463IPR001471AP2/ERF domain
SMARTSM003801.2E-341477IPR001471AP2/ERF domain
PRINTSPR003674.9E-111526IPR001471AP2/ERF domain
PRINTSPR003674.9E-113753IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MAPSSSASAS REGHYRGVRK RPWGRYAAEI RDPWKKTRVW LGTFDTPEEA ALAYDGAARS  60
LRGAKAKTNF PPAPPLCLDL NVPSSDHRWP HHVPPRSLVL SDFLHTAVLR DIDPPQQPFP  120
PAAAVAHRNP HGGAMPVGGG VQVMEGSPTA SFLGFVRRGI PIDLNEPPPM WL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-211471260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-211471563ATERF1
3gcc_A3e-211471563ATERF1
5wx9_A9e-21171172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.246410.0vegetative bud
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G077000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003545996.11e-122ethylene-responsive transcription factor 12
RefseqXP_028202862.11e-122ethylene-responsive transcription factor 12-like
SwissprotQ94ID64e-45ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLA0A445GQP81e-121A0A445GQP8_GLYSO; Ethylene-responsive transcription factor 12
TrEMBLI1MEL81e-121I1MEL8_SOYBN; Uncharacterized protein
STRINGGLYMA15G08360.11e-122(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.11e-46ERF domain protein 12