PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G123000.2.p
Common NameGLYMA_15G123000, LOC100786397
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 241aa    MW: 26216.8 Da    PI: 6.6745
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G123000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.77.9e-111233355
              G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55
                         +++m+vkgLtl h+kSHLQkYRl
  Glyma.15G123000.2.p  1 MRTMNVKGLTLFHLKSHLQKYRL 23
                         689*******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.7E-10124IPR009057Homeodomain-like
PfamPF143791.4E-1564109IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MRTMNVKGLT LFHLKSHLQK YRLGKQSGKD VGEGCKDGSY LLESPGADNS SPKLPTSDTN  60
EGYEIKEALR AQMEVQSKLH LQVEAEKHLQ IRQDAERRYM AMLERACKML ADQFIGATVI  120
DTDSQKFQGI GSKAPRGTLV DPLGFYSMPS TEVAGVNVPE EEIPLSLPPQ RADCSTESCL  180
TSHESSGGLA LEGSPGEGKR RMLGMDSMAA PLIWSEAKMR TQAINVAQGN LPQGITRYGM  240
*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.556510.0cotyledon| leaf| meristem| root| seed coat| somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G123000.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0936500.0BT093650.1 Soybean clone JCVI-FLGm-24E4 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006597013.11e-180MYB-CC domain-containing transcription factor PHR24 isoform X2
RefseqXP_028204941.11e-180protein PHR1-LIKE 2-like isoform X2
TrEMBLA0A445GSF91e-177A0A445GSF9_GLYSO; Protein PHR1-LIKE 2 isoform A
TrEMBLC6T8561e-177C6T856_SOYBN; Uncharacterized protein
TrEMBLI1MFV61e-178I1MFV6_SOYBN; Uncharacterized protein
STRINGGLYMA15G12930.11e-177(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.14e-36G2-like family protein