PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G273400.2.p
Common NameGLYMA_15G273400
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family C2H2
Protein Properties Length: 258aa    MW: 28387.5 Da    PI: 5.8927
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G273400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00016187201317
                          ETTTTEEESSHHHHH CS
              zf-C2H2   3 CpdCgksFsrksnLk 17 
                          C+ C+ksF+r  nL+
  Glyma.15G273400.2.p 187 CHVCSKSFNRYNNLQ 201
                          ************998 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MTDPKSNVYT ETFNFMPLYS HHSSFTSQSS LLSSYPLSYS NTNTNTFSNQ SDTSSSSCAA  60
PPPSSPLREA LPLINNIKQK KNEPSNGGEE VEEEGQKKRD IDETLLTSIT EEGDDDETVT  120
VALQIGLPSV ATSDLNGSRK IFEACAKMDV KEDVRVISGH PLDRLNNIQY WIPTPSQILI  180
GPTQFLCHVC SKSFNRYNNL QVASTTLTTQ EQGLSRTSEP FKHTTRENTA LNPTCAENVT  240
KHLQSKVIGG HMRRTVA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G273400.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003545973.11e-145zinc finger protein WIP2
RefseqXP_028202067.11e-145zinc finger protein WIP2-like
TrEMBLA0A0R0GFE40.0A0A0R0GFE4_SOYBN; Uncharacterized protein
STRINGGLYMA15G42870.11e-145(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-17C2H2 family protein