PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Glyma.16G101400.1.p

Common Name

GLYMA_16G101400

Organism

Glycine max

Taxonomic ID

3847

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

ZF-HD

Protein Properties

Length: 118aa MW: 13421.9 Da PI: 5.7815

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.16G101400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	41.2	4e-13	2	44	16	59
ZF-HD_dimer 16 slGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 s Ggha C+Ef+++ e+ t +++ C AC+ HRnFH +e ++ Glyma.16G101400.1.p 2 SFGGHAANDCCEFLAA-REDDTLETVICVACNYHRNFHCKEIDD 44 68***********9.55569****************9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51523	14.625	1	41	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	2.0E-7	2	48	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	3.8E-11	2	42	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence Send to blast
MSFGGHAAND CCEFLAARED DTLETVICVA CNYHRNFHCK EIDDEITSIH HRHNPLVLLA 60 IASDGSLSHE EELAWSSQRV VQPTTSYTSL FSENDKQTKF CRTNRNRNHY LLIFECC*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.16G101400.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027332707.1	1e-20	zinc-finger homeodomain protein 2-like
TrEMBL	A0A0R0FW91	3e-82	A0A0R0FW91_SOYBN; Uncharacterized protein
STRING	GLYMA14G35770.1	7e-20	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP91	16	237

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14440.2	4e-12	homeobox protein 31

Link Out ? help Back to Top
Phytozome	Glyma.16G101400.1.p