PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G076000.2.p
Common NameGLYMA_17G076000
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 527aa    MW: 57819.3 Da    PI: 5.1488
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G076000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like83.72e-26111164155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          kprl+W  eLH++F+ a+++L G++kA Pk+il+lm+v+gLt+e+++SHLQkYRl
  Glyma.17G076000.2.p 111 KPRLVWDAELHRKFLAAINHL-GIDKAFPKRILDLMNVEGLTRENIASHLQKYRL 164
                          79*******************.********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011012.414129IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23001.2E-7336No hitNo description
SuperFamilySSF521725.58E-5336IPR011006CheY-like superfamily
PROSITE profilePS5129411.39108167IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.2E-27108168IPR009057Homeodomain-like
SuperFamilySSF466891.97E-18109168IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-24111164IPR006447Myb domain, plants
PfamPF002492.0E-5114163IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MRGVIHGACD YLTKPVRIEE LQNIWQHVVR RRIDSKDKNK TASEGKACSM AGKLANEEKA  60
CYMAGECSQA MASKSNADQN IKLGQKRKEQ SEDEEEEEYD QENEEPSNQK KPRLVWDAEL  120
HRKFLAAINH LGIDKAFPKR ILDLMNVEGL TRENIASHLQ KYRLGLKKST QQPSMVATLG  180
NSDPYQQMDS IEGFRTLSGS GGMISTTLPS YASGGLFCRL NSPSGLRGIN SSLLVQPVHS  240
QNIDSRSIKT LGNMQLSMFS ANQTSSLLQG IPTSIDGNSP PTHNSGAFGN HSSLGAASVK  300
TQSFDPGICE LGYNRCNKSW QGTTQISKFP ANTSAVSNND QLAQNNLNFS SSTFCSGNSP  360
VDFSSTSVVA PPLEDARGKL RCQEGLLENI LLTSCYTQHQ SWEADNRGCN KEMSQTFNTI  420
KSVSPNGDTS SLGHSLDQNN TVSSKRIDVS LVNPSVTQSS EDEKFYSMES IDGCILQSME  480
SQEDLMQNTF ESLDDIMSEI TKQEQNAIML MDGEMEFDAY HVGSCI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A4e-25109168362ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G076000.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006600558.10.0two-component response regulator ARR10 isoform X2
RefseqXP_028208241.10.0two-component response regulator ARR10-like isoform X2
TrEMBLA0A0R0FKQ50.0A0A0R0FKQ5_SOYBN; Uncharacterized protein
STRINGGLYMA17G08380.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.11e-50response regulator 18