PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G178500.3.p
Common NameGLYMA_17G178500, LOC100794220
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 345aa    MW: 38314.5 Da    PI: 8.9637
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G178500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.91.9e-32208263156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k+r++W+p+LH+rFv+a++qLGG+++AtPk+i+elm+v gLt+++vkSHLQkYRl+
  Glyma.17G178500.3.p 208 KQRRCWSPDLHRRFVDALQQLGGPQVATPKQIRELMQVVGLTNDEVKSHLQKYRLH 263
                          79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.408205265IPR017930Myb domain
SuperFamilySSF466896.28E-18206266IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.7E-29206266IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-26208263IPR006447Myb domain, plants
PfamPF002491.1E-7210261IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MEVSLDLSLA FVPRRTVCEI LGDIAKSKDG SRRMATIEDL VKRLEDEKKK IEAFKPISKL  60
KEEIKGGVRM KDEAVVEELM KLMKTNSEAN GSLMIVGNES SDTKNWMNSV QLWNVETKQR  120
NEEGDLFVPS NPIEQKNDTN KSVSKTVMKD NKKMSQVPSL GLMSPAVLEL NHRKTESGYG  180
HGSSMIITSS VEIKGHHQSQ QPQQNPRKQR RCWSPDLHRR FVDALQQLGG PQVATPKQIR  240
ELMQVVGLTN DEVKSHLQKY RLHFKRPQGS SIGHANSGLC KMAQDKCGDD KSGSPQGPLF  300
LGGSGKGLSS SGRNSMDTEG DEESDCRNWK GGIHHQLQPE SDVL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G178500.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0969310.0BT096931.1 Soybean clone JCVI-FLGm-21I16 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003551053.10.0transcription factor HHO5 isoform X2
RefseqXP_028209875.10.0transcription factor HHO5-like isoform X2
TrEMBLA0A445G8730.0A0A445G873_GLYSO; Transcription factor HHO5 isoform B
TrEMBLK7MM940.0K7MM94_SOYBN; Uncharacterized protein
STRINGGLYMA17G20520.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.18e-39G2-like family protein