PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Glyma.17G197300.1.p

Common Name

GLYMA_17G197300, LOC102660746

Organism

Glycine max

Taxonomic ID

3847

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 153aa MW: 17173.4 Da PI: 6.5136

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.17G197300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21	7.5e-07	8	47	24	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 24 KkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++a +eeL++kv++L aeN+ Lk e e ke+++l++ + Glyma.17G197300.1.p 8 FQALCEELTRKVATLVAENENLKREKELALKEYESLETTN 47 699********************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence Send to blast
MSVYIKMFQA LCEELTRKVA TLVAENENLK REKELALKEY ESLETTNKNL KTQIAKSINT 60 EVEKTPVEPV SSVAEITPSS GNGPWFLYNH FPVPQIFWPS ILQSSNPIHL QNTSFNSIAI 120 PPNANVSCSS ESESHHKQNN LINDNRTRVI TF*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.691	1e-159	cotyledon\| leaf\| somatic embryo\| stem

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.17G197300.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC187164	1e-127	AC187164.9 Glycine max cultivar Williams 82 clone gmw2-53i18, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006604633.1	2e-90	uncharacterized protein LOC100788624 isoform X1
Refseq	XP_006604635.1	1e-90	uncharacterized protein LOC100788624 isoform X3
Refseq	XP_028216377.1	2e-90	uncharacterized protein LOC114398390 isoform X1
Refseq	XP_028216378.1	1e-90	uncharacterized protein LOC114398390 isoform X2
TrEMBL	A0A0R0FFB1	1e-106	A0A0R0FFB1_SOYBN; Uncharacterized protein
STRING	GLYMA17G29170.1	1e-100	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6400	28	34
Representative plant	OGRP4569	13	18

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	2e-25	bZIP family protein

Link Out ? help Back to Top
Phytozome	Glyma.17G197300.1.p
Entrez Gene	102660746