PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G219700.1.p
Common NameGLYMA_17G219700, LOC102665533
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 257aa    MW: 29354.3 Da    PI: 4.3724
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G219700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.42.7e-163179355
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         +kGVr +k +g+Wv+eIr p++   r r++lg+++t  +Aa+a +aa  +l+g
  Glyma.17G219700.1.p 31 FKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTQVKAARAFDAALYCLRG 79
                         8****999.**********933...5**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.6E-283088IPR001471AP2/ERF domain
SMARTSM003802.2E-293093IPR001471AP2/ERF domain
PROSITE profilePS5103220.9693087IPR001471AP2/ERF domain
SuperFamilySSF541715.23E-193088IPR016177DNA-binding domain
PRINTSPR003676.0E-83142IPR001471AP2/ERF domain
CDDcd000181.68E-273189No hitNo description
PfamPF008473.7E-93179IPR001471AP2/ERF domain
PRINTSPR003676.0E-85369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MVKSAMASVD SSSCNNDSFS SNNNIDSCKM FKGVRKRKWG KWVSEIRLPN SRERIWLGSY  60
DTQVKAARAF DAALYCLRGQ SATFNFPDTP RHLETNMVLS RDKQPQPLSH QEIQEVAVKF  120
ANNDDHPLEE EECAFQKQEQ ERSLEESQSD ESKSGNTIME MSNFPSIYDG ETHNNNVQVD  180
QLKGDWDTMD WTFLNMLDDL NGSDFGLYVG LDKMHPSEFL CPMTQAPLLY HGDDEIEGDD  240
DHDAFSNHSL LWSWNF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1531871572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13137KGVRKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G219700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006601199.10.0ethylene-responsive transcription factor ERF017
RefseqXP_028208804.10.0ethylene-responsive transcription factor ERF017-like
TrEMBLA0A445GA870.0A0A445GA87_GLYSO; Ethylene-responsive transcription factor ERF017
TrEMBLK7MNA50.0K7MNA5_SOYBN; Uncharacterized protein
STRINGGLYMA17G33535.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-38ERF family protein