PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G253200.1.p
Common NameGLYMA_17G253200
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 193aa    MW: 22142.3 Da    PI: 10.2754
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G253200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1361.5e-1160119463
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                           ++ +rkq+NRe+ArrsR RK++ ++ L   v+ L+++ +   k+++  ++++ k+++e+
  Glyma.17G253200.1.p  60 QRKKKRKQSNRESARRSRMRKQKHLDDLIAQVDLLKKQKSLTLKKVNITTQHCLKVEAEN 119
                          5789***********************************988899999999999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-1457121IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.5359122IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.1E-859112No hitNo description
PfamPF001701.0E-760115IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-1061114No hitNo description
CDDcd147022.81E-1762112No hitNo description
PROSITE patternPS0003606479IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MSPVLSEILR SGFMINSSLR RRTHLVQSFS VVFLYCGTSS TSILLQSSGS EEDLQLLMEQ  60
RKKKRKQSNR ESARRSRMRK QKHLDDLIAQ VDLLKKQKSL TLKKVNITTQ HCLKVEAENS  120
ILGAQKTELT QSLQSLNDII NLINTTTTSD HNNYYYNNNN NNNNNNFMMN PMHMAYLNQP  180
IVATADNNMF LW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16081RKKKRKQSNRESARRSRMRKQK
27380RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.158700.0flower| leaf
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G253200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2352561e-78AC235256.1 Glycine max strain Williams 82 clone GM_WBb0037K19, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003550395.11e-111bZIP transcription factor 11
TrEMBLA0A0R0FII41e-138A0A0R0FII4_SOYBN; Uncharacterized protein
STRINGGLYMA17G37180.11e-110(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.14e-27basic leucine-zipper 44