PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.19G122700.4.p
Common NameGLYMA_19G122700
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 191aa    MW: 21104.4 Da    PI: 5.1229
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.19G122700.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.11.3e-101203655
              G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                         m+v+gLt++hvkSHLQkYRl
  Glyma.19G122700.4.p  1 MGVPGLTIYHVKSHLQKYRL 20
                         99*****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.2E-10121IPR009057Homeodomain-like
PfamPF143795.2E-255298IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MGVPGLTIYH VKSHLQKYRL AKYLPESPAD DPKDEKRMSG DSISGADSSS GMPINDALRM  60
QMEVQKRLHE QLEVQKQLQM RIEAQGKYLQ KIIEEQQKLG STLTTSETLP LSHDKQNHPQ  120
SEASGSSDAL ASTVSPLKKQ RIDDGSKEGF TASQVRKNDN VGQLDPNLYD DAGFGFDLET  180
KKDEDNESGQ *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.137280.0cotyledon| leaf| root| somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.19G122700.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0951130.0BT095113.1 Soybean clone JCVI-FLGm-19M19 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006604295.11e-136MYB-CC domain-containing transcription factor PHR30 isoform X2
RefseqXP_028218693.11e-136myb family transcription factor PHL7-like isoform X2
SwissprotQ9SJW06e-46PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLI1N8K11e-136I1N8K1_SOYBN; Uncharacterized protein
STRINGGLYMA19G30220.11e-134(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.27e-39G2-like family protein