PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.19G122700.5.p
Common NameGLYMA_19G122700
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 205aa    MW: 22471.1 Da    PI: 6.0379
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.19G122700.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.35.3e-164322755
              G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                         AtPk +l++m+v+gLt++hvkSHLQkYRl
  Glyma.19G122700.5.p  4 ATPKGVLRVMGVPGLTIYHVKSHLQKYRL 32
                         9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.51E-6432IPR009057Homeodomain-like
TIGRFAMsTIGR015574.2E-11433IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.604.4E-15433IPR009057Homeodomain-like
PfamPF143795.9E-2566112IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MAGATPKGVL RVMGVPGLTI YHVKSHLQKY RLAKYLPESP ADGKDPKDEK RMSGDSISGA  60
DSSSGMPIND ALRMQMEVQK RLHEQLEVQK QLQMRIEAQG KYLQKIIEEQ QKLGSTLTTS  120
ETLPLSHDKQ NHPQSEASGS SDALASTVSP LKKQRIDDGS KEGFTASQVR KNDNVGQLDP  180
NLYDDAGFGF DLETKKDEDN ESGQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.137280.0cotyledon| leaf| root| somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.19G122700.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ0073110.0HQ007311.1 Glycine max cultivar Jidou11 MYB transcription factor (PHR1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006604296.11e-147MYB-CC domain-containing transcription factor PHR30 isoform X3
RefseqXP_028218694.11e-147myb family transcription factor PHL7-like isoform X3
SwissprotQ9SJW07e-53PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLI1N8K01e-147I1N8K0_SOYBN; Uncharacterized protein
STRINGGLYMA19G30220.11e-144(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-45G2-like family protein