PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.19G145300.3.p
Common NameGLYMA_19G145300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 380aa    MW: 42773.8 Da    PI: 9.5962
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.19G145300.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.87.6e-1188117534
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                          k  rr+++NReAAr+sR+RKka++++Le  
  Glyma.19G145300.3.p  88 KTLRRLAQNREAARKSRLRKKAYVQQLESS 117
                          7789***********************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.0E-982130No hitNo description
SMARTSM003381.2E-784157IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.2286130IPR004827Basic-leucine zipper domain
PfamPF001705.4E-888121IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-788130No hitNo description
PROSITE patternPS00036091106IPR004827Basic-leucine zipper domain
PfamPF141444.6E-32180253IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MRPPTLNIFP SKPMHVEPSS SKAKANIELV SPQTSGSKRP SEPSMELANP RNETASAPQP  60
PKPVKRESNR KGPTSSSEHE GPKTPDPKTL RRLAQNREAA RKSRLRKKAY VQQLESSRIR  120
LNQLEQELQR ARTQGMFLGG GALLGGEQGL PVTMNTISTE AAMFDVEYAR WQEEHHRIVC  180
ELRAAVQEHL PENELRLFVD NCLAHYDQVM NLKSLVAKTD VFHLVSGTWK TPAERCFMWI  240
GGFRPSELIK IIVRQIEPLT EQQILGICGL QQSTQEAEEA LSQGLEALNQ SLSDTITSDS  300
LSYPPNMANY MGQMAVAMNK LSTLEGFVRQ ADNQRHQTIH RLHQILTTRQ AARCFLAIAE  360
YFHRLRALSS LWLARPRQE*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.543170.0seed coat
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.19G145300.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003554196.10.0bZIP transcription factor TGA10 isoform X2
RefseqXP_025983011.10.0bZIP transcription factor TGA10 isoform X3
RefseqXP_028216016.10.0bZIP transcription factor TGA10-like isoform X2
RefseqXP_028216017.10.0bZIP transcription factor TGA10-like isoform X3
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0B2R3C20.0A0A0B2R3C2_GLYSO; BZIP transcription factor TGA10 isoform A
TrEMBLA0A0R0EWS80.0A0A0R0EWS8_SOYBN; Uncharacterized protein
TrEMBLK7MYF00.0K7MYF0_SOYBN; Uncharacterized protein
STRINGGLYMA19G32715.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-164bZIP family protein