PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.20G007700.2.p
Common NameGLYMA_20G007700, LOC102665715
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 224aa    MW: 25532.8 Da    PI: 5.2041
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.20G007700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.62.1e-16138196361
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                          e++rer++q+NRe+ArrsR RK++e+eeL + ++ L+ eN+ L ++l++l++e+ +  +
  Glyma.20G007700.2.p 138 EIRRERKRQSNRESARRSRMRKEKECEELHKQMEMLKDENSVLTQRLKSLSEECLEICN 196
                          899***************************************************87655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.8E-14133192No hitNo description
SMARTSM003381.4E-15136200IPR004827Basic-leucine zipper domain
PfamPF001705.9E-14137193IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.771138190IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.69E-11139194No hitNo description
CDDcd147025.99E-18141191No hitNo description
PROSITE patternPS000360143158IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MGTQKSNMFD APFKYMVPED KEIPDRPLPS HWTPSMQAYN TSGSTPTPFL NQQAAGSHMP  60
LYMWVNQVNN TLLQSDALHD PRMLSSKPTV AGDFPSTKKQ HCNLMLENAS STKLNQDLET  120
GLDASDANAQ LVNLEKDEIR RERKRQSNRE SARRSRMRKE KECEELHKQM EMLKDENSVL  180
TQRLKSLSEE CLEICNENDA IEEELIKMYG PESIADLLLF KPT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152159RRSRMRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.20G007700.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006605463.11e-167uncharacterized protein LOC102665715 isoform X2
RefseqXP_028221190.11e-167uncharacterized protein LOC114402727 isoform X2
TrEMBLK7N0M31e-166K7N0M3_SOYBN; Uncharacterized protein
STRINGGLYMA20G01030.11e-112(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.21e-22G-box binding factor 1