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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.20G176800.1.p |
| Common Name | GLYMA_20G176800 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 466aa MW: 53170.4 Da PI: 6.6879 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.20G176800.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 305.9 | 9.5e-94 | 84 | 463 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
l++lLl+ A+av+++++ + La l +++s +gd++qR++ayf+ +L+arl+ s y+ l ++t+ +ee+ +++ ++ vsP+
Glyma.20G176800.1.p 84 LIHLLLSTATAVDDNNMDSSLENLADLYQTVSITGDSVQRVVAYFVDGLSARLLTRKSPFYDMLMEEPTT----EEEFLSFTDLYRVSPY 169
689****************************************************9*****999998887....5667777889****** PP
GRAS 91 lkfshltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelg 173
++f+h+taNqaIlea+e+e +++H+iDfd+s+G+QWp+L+q+L++++ ++ slRiTg+g+ + +el+et++rL +f + +g
Glyma.20G176800.1.p 170 FQFAHFTANQAILEAFEKEeernnRALHVIDFDVSYGFQWPSLIQSLSEKAtsGNRISLRITGFGK----NLKELQETESRLVNFSKGFG 255
*****************9988877789**********************99755566*********....99****************97 PP
GRAS 174 .vpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
+ fef+ l l ++ +Lr k++E++aVnlv l +l + + ++++L +v sl+P +vvvveqe +++ sFl rf+++l+
Glyma.20G176800.1.p 256 sLVFEFQGL----LRGSRVINLRKKKNETVAVNLVSYLNTLS----CFMK-ISDTLGFVHSLNPSIVVVVEQEGSRSPRSFLSRFTDSLH 336
689*****8....77778899***************999997....3333.578************************************ PP
GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegae..rrerhetlekWrerleeaGFkpvplsekaakqaklllrkv...... 344
y++a+fdsl+ lp es er +E++llg+ei++++ + + + e++e+W++r+e+ GF + ++s+k + qaklll++
Glyma.20G176800.1.p 337 YFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKSMLNNDVDGgvDCPKYERMETWKARMENHGFVATKISSKSMIQAKLLLKMRthycpl 426
************************************9986663356799********************************985222222 PP
GRAS 345 ..ksdg...yrveee.sgslv.lgWkdrpLvsvSaWr 374
+++g +rv e+ +g ++ lgW++r L++vSaW+
Glyma.20G176800.1.p 427 qfEEEGgggFRVSERdEGRAIsLGWQNRFLLTVSAWQ 463
1122223348887664555557**************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 466 aa
Download sequence Send
to blast |
MKDMEDSEED ELLNLSLSVA ADRERKKKGK TIREHNVSMS STTTTTRNSY ERKIFRLLQM 60
REQMLRQDHH RRKGVVEDGN GLPLIHLLLS TATAVDDNNM DSSLENLADL YQTVSITGDS 120
VQRVVAYFVD GLSARLLTRK SPFYDMLMEE PTTEEEFLSF TDLYRVSPYF QFAHFTANQA 180
ILEAFEKEEE RNNRALHVID FDVSYGFQWP SLIQSLSEKA TSGNRISLRI TGFGKNLKEL 240
QETESRLVNF SKGFGSLVFE FQGLLRGSRV INLRKKKNET VAVNLVSYLN TLSCFMKISD 300
TLGFVHSLNP SIVVVVEQEG SRSPRSFLSR FTDSLHYFAA MFDSLDDCLP LESAERLRIE 360
KKLLGKEIKS MLNNDVDGGV DCPKYERMET WKARMENHGF VATKISSKSM IQAKLLLKMR 420
THYCPLQFEE EGGGGFRVSE RDEGRAISLG WQNRFLLTVS AWQSV*
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| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
