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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.20G200500.1.p |
| Common Name | LOC100785293 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 400aa MW: 44500.9 Da PI: 6.6495 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.20G200500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 410.6 | 1.5e-125 | 28 | 385 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel.aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88
l+++L++cA+ ++ g+++ a +l+++++ l a + + ++aa+f AL++r+++ ++p+s++ e+ ++ ++e++
Glyma.20G200500.1.p 28 LIHTLMTCADSLQRGHFSFAASLIQNMQGLlAHVNTnCGIGKVAACFIDALRRRISN-------KFPASSA-----YENDVLYHNYYEAC 105
689*************************996443332699****************9.......3444444.....344456788***** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
P+lkf+h+taNqaIlea++g+++vH+iDf+++qGlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++++++l+e+g rLa++A++++v+f f
Glyma.20G200500.1.p 106 PYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGIGPPSAENRDNLREIGLRLAELARSVNVRFAF 195
****************************************************************************************** PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
+ ++a rled+++++L+v+p+Ea+aVn+++qlhrl + + ++e+ vL ++ l+Pk+v+vveqea+hn+e Flerf+eal+yys++f
Glyma.20G200500.1.p 196 RGVAAWRLEDVKPWMLQVSPNEAVAVNSIMQLHRLTAVKSAVEE----VLGWIRILNPKIVTVVEQEANHNGEGFLERFTEALHYYSSVF 281
**9888*****************************965555555....****************************************** PP
GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
dsl+a + + +++ + +++l+rei+nvv+ceg +r erhe l+kWr+rl++aGF++++l+ +a+kqa++ll ++ +g+ v+e++gsl
Glyma.20G200500.1.p 282 DSLDAC--PVEPDKAALAEMYLQREICNVVCCEGPARLERHEPLAKWRDRLGKAGFRALHLGFNAYKQASMLLTLFSAEGFCVQENQGSL 369
***998..5678888889999********************************************************************* PP
GRAS 359 vlgWkdrpLvsvSaWr 374
+lgW++rpL+++SaW+
Glyma.20G200500.1.p 370 TLGWHSRPLIAASAWQ 385
***************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MSLPSHYHLS SDLPDFATTV EEHSGIRLIH TLMTCADSLQ RGHFSFAASL IQNMQGLLAH 60
VNTNCGIGKV AACFIDALRR RISNKFPASS AYENDVLYHN YYEACPYLKF AHFTANQAIL 120
EAFNGHDCVH VIDFNLMQGL QWPALIQALA LRPGGPPLLR LTGIGPPSAE NRDNLREIGL 180
RLAELARSVN VRFAFRGVAA WRLEDVKPWM LQVSPNEAVA VNSIMQLHRL TAVKSAVEEV 240
LGWIRILNPK IVTVVEQEAN HNGEGFLERF TEALHYYSSV FDSLDACPVE PDKAALAEMY 300
LQREICNVVC CEGPARLERH EPLAKWRDRL GKAGFRALHL GFNAYKQASM LLTLFSAEGF 360
CVQENQGSLT LGWHSRPLIA ASAWQAAPLG DDETLRFEH*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. |
