PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.20G216700.1.p
Common NameGLYMA_20G216700, LOC100798158
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 814aa    MW: 90732.9 Da    PI: 4.449
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.20G216700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.67.2e-066256621355
                          HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          R++i +++ eLr+l+P++     +K s  + L ++++Y+  Lq
  Glyma.20G216700.1.p 625 RQQIQDCIKELRRLIPND-----GKCSIDSLLDRTIRYMLFLQ 662
                          89***************9.....8999999**********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142152.1E-1454145IPR025610Transcription factor MYC/MYB N-terminal
CDDcd000836.57E-5609666No hitNo description
PROSITE profilePS5088811.376612661IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.06E-6625673IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-4625667IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0035556Biological Processintracellular signal transduction
GO:0005829Cellular Componentcytosol
GO:0004674Molecular Functionprotein serine/threonine kinase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 814 aa     Download sequence    Send to blast
MTMPLTLRNK LKTLCTCGDG WSYAIFWRFH PRNSLLLTVE EAYYEEHLGE EIANMHPQVH  60
LLGEGIVGEA AFTGKHSWVH SDGLTHDWNL TGQNTCEDDS ELQQQFSSGI KTIVVVPVKA  120
WGVVQFGSRK KILEKVEFLE QTQSVLTEMD DDMGMFDMPG NAVLPLDCEN NDLNGFLDSI  180
SSASPNNSFP SQYNTYEESV ATLQGDSSYL GDQLKGTMEA LVVLSDRDSA DVLLKPNSST  240
NNLIAENPYF GVCGNELSSF DLLEQQLVSC VSAQEDADVC FTNENAFATS ELLGQDLALT  300
SLCSMDRGSF QGKLQNSLDN QYSTQSSVVT DVDFSSSLNA LHGLSENLER VDMSEEILKF  360
SSMEDLCQWF GPSPKDSICK AVIALDNTFS ESTEFNPTSF DLVGSSSLND ISVTCLTGQN  420
SNSEGKETSV VMHSTENALL DNLKLDFSYD QADEWWGNML TPVVSGVTDT GFSECISELN  480
TDIPTGTRKR LFSELGIDEL LRGEANYNPF NSSELEHELL LPNKRQTVES SSVNRNSIPF  540
TNLHWPGVAR ADLTQTFCDL DSANNLPTKK DKFPKLQTGM WNDDSHSINI GKAVPVHPQK  600
PEEPAKPPKK RARAGESTRP RPKDRQQIQD CIKELRRLIP NDGKCSIDSL LDRTIRYMLF  660
LQSVVKYSDK LQEPNEPKLI EQANKVVLKD SGAADGKNCG ITWAYEVAHQ PMLCPIIVED  720
MSLPGQMLIE MLCEEQGFFL EIIDIIRHFG LNILKAKMER RRNKLWARFI VEANNRHVTR  780
IDVFLSLIRF LQQTNTSGID SSNKNCDVID ANI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.20G216700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006606416.10.0transcription factor bHLH157
TrEMBLK7N4X70.0K7N4X7_SOYBN; Uncharacterized protein
STRINGGLYMA20G35921.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF69551621
Representative plantOGRP152168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.16e-40conserved peptide upstream open reading frame 7