PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G003152.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 503aa    MW: 56298 Da    PI: 7.8014
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G003152.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35.1e-11211250544
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                           k  rr+++NReAAr+sR+RKka++++Le    +L++  ++
  HL.SW.v1.0.G003152.1 211 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 250
                           7789************************876666655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-8204253No hitNo description
SMARTSM003383.7E-9207271IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289209253IPR004827Basic-leucine zipper domain
PfamPF001704.0E-8211251IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.19E-7211253No hitNo description
CDDcd147081.47E-22211263No hitNo description
PROSITE patternPS000360214229IPR004827Basic-leucine zipper domain
PfamPF141442.7E-31302376IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    Send to blast
MASSIKGNNN NNQTSNSTSD QTPLLFQHQQ HHQIQGHHHH HQHPKQIPYN MINQSSSSSS  60
LGNFISKDSN STTGAYDMGE LDQALFLYLD GQDHHPSNNF QEHHHQRQNS GGTGMRPPTL  120
NIFPSQPMHV VEPASSTKGS PPMSGSIDNS KRPSDPSSME LANSTRNDNN STAAPSVPDS  180
AANKAIKREG NNRKGPTSSS EQEGPKTPDP KTLRRLAQNR EAARKSRLRK KAYVQQLESS  240
RIKLTQLEQE LQRARAQGMF FNGGTLVGGE QGLPIGINNT SQEAAVFDME YGRWQEEHHR  300
LMCELRAAVH EHLSENELRI FVENCLAHYD QMMNLKSMVA KFDVFHLISG VWKTPAERCF  360
MWMGGFRPSE LIKIILSQIE PLTEQQILGI CGLQQSTQEA EEALSQGLES LNQSLSDTIT  420
SDSLSCPPNM VNYMGQMAVA MNKLSTLEGF VRQADNLRHQ TLHRLHQLLT TRQAARCLLA  480
IAEYFHRLRA LSSLWLTRSR QE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010111398.10.0bZIP transcription factor TGA10
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2P5BTZ00.0A0A2P5BTZ0_PARAD; Basic-leucine zipper transcription factor
STRINGXP_010111398.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-178bZIP family protein