PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

HL.SW.v1.0.G004947.1

Organism

Humulus lupulus

Taxonomic ID

3486

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus

Family

bZIP

Protein Properties

Length: 289aa MW: 31890.7 Da PI: 8.0932

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
HL.SW.v1.0.G004947.1	genome	HOPBASE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.7	9.1e-07	170	204	18	52
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +rsR RK+++i+eLe+ v++L++ ++L+ ++++l HL.SW.v1.0.G004947.1 170 QRSRIRKLQYIAELERTVDVLQTLESDLAFRVSSL 204 79**********************99999888777 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	2.95E-13	165	208	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.8E-5	170	223	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence Send to blast
MTTRQSQAQV QAHLPPRCPI QKRPISAQIQ NNNPSSQPFV EDHPAWLDDL LNDPDSNSKG 60 GSLRRSVSDS VTLLAPHYDE RNSVGNPANS GLDSTSYMYG PNSPRLRSSS SFSENAIVSA 120 LSEYVSHDSG EHIDGGGCVS GARSSSNLFD MNTDGALNAD AKTVKRHPGQ RSRIRKLQYI 180 AELERTVDVL QTLESDLAFR VSSLLQQRVA LSMENNKLKQ QLARVRKEKL IVDGEYQVLR 240 KEAKRLKSDL INSSHSQIRT CFVPNPPAEA GSLEAMQMTL DMEKLNLY*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010090487.1	1e-122	basic leucine zipper 6
Refseq	XP_024017480.1	1e-122	basic leucine zipper 6
TrEMBL	A0A2P5DAD3	1e-155	A0A2P5DAD3_PARAD; Basic-leucine zipper transcription factor
STRING	XP_010090487.1	1e-121	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14541	5	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	2e-16	bZIP family protein